Week |
Lectures |
S & R (2019) |
Topic |
Last Revised |
Lab Date |
Lab Materials |
1 |
05 Sept |
Introduction; background quiz |
30
Aug 2024 |
05
Sept 2024 |
Lab
Exercise: DNA structure (02
Sept 2024); Install MATLAB; Install MEGA |
|
1
& 2 |
10, 12 Sept |
Allele & Genotype frequencies; Hardy-Weinberg Theorem | 30 Aug 2024 | 12 Sept 2024 | Statistical Hypothesis
Testing; Chi-square
test; Biol4250 Chi-Square & G test Workbook (2024 Sept 18); Lab Exercises: Testing Hardy-Weinberg expectations (2024 Sept 12) |
|
3 |
17, 19 Sept |
Darwin's Theory of Natural Selection |
30 Aug 2024 | 19 Sept 2024 | Workbook for Natural
selection exercises (revised 2024 Sept 25); Lab Exercise: Natural Selection in ecological genetics (2024 Sept 25) |
|
4 |
24 & 26
Sept |
4.2; 5.2 |
The General Theory of
Natural Selection |
08 Aug 2024 | 26
Sept 2024 |
Workbook
for Natural Selection in
variable environments
(revised
2024 Oct 09); Lab Exercise: Natural Selection in variable environments (2024 Oct 03) |
Monday,
30 Sept |
National
Day of Truth & Reconciliation |
30 Sept | ||||
5 | 01, 03, 08 Oct | Alternative Models of Natural Selection | 04 Oct 2024 | 03 Oct 2024 |
Natural Selection
under other conditions (revised 2024 Oct 10); Lab Exercise: Additive, Genic, & Haploid Selection (2024 Oct 10) Estimation of Selection Coefficients (2024 Sept 18); |
|
6 |
10 Oct |
Fitness, Adaptation, & Selection in Natural Populations | 10 Oct 2024 |
Complete Natural
Selection exercises |
||
14-15 Oct |
Thanksgiving; Fall
Break |
|
No Lecture, Oct 15 |
|||
17 Oct |
Midterm Exam questions |
17 Oct 2024 |
Midterm in
Lecture slot [Thursday is Tuesday] |
|||
7 |
22, 24 Oct |
1.3; 2 | Fitness, Adaptation, &
Selection in Natural Populations (Cont'd) |
08 Aug 2024 | 24 Oct 2024 | Lab
exercise: Migration
/ Selection in Water Snakes Worksheet for m |
8 |
29, 31 Oct |
1.2; 2 |
Natural Selection in equilibrium with Mutation; Migration; Inbreeding |
08 Aug 2024 | 31 Oct 2024 | Lab
Exercise: Worksheet |
9 |
05, 07 Nov |
2.2; 3.4; 4.4 |
Mendel's Century (1901 - 2024) | 08 Aug 2024 | 07 Nov 2024 | Data sets for allozyme, DNA,
Micro-satellite analysis (TBA) |
10 | 11 Nov | Remembrance Day | 11 Nov 2024 |
|||
11 |
12, 14, Nov |
2; 3.3,4,5 |
Genetic
Drift; Selection & Genetic Drift in Finite Populations; |
11 Sept 2024 | 14 Nov 2024 | WriFish.m script ; MATLAB app (2020 Oct
29); Lab Exercise: Natural Selection & Genetic Drift (2024 Nov 14) |
12 | 19, 21 Nov | 3.2,3 | Molecular Phylogeography: Genetic variation in time & space |
08 Aug 2024 | 21 Nov 2024 | Lab Exercise: F-statistics
& Population Structure (2024 Nov 18); F-Statistics worksheet for F-statistics (2024 Nov 20) |
13 |
26, 28 Nov |
8 |
Molecular Systematics: Phylogenetic reconstruction [Review] | 08 Aug 2024 | 28
Nov 2024 |
Download
MEGA:
Lab Exercise: Molecular
Evolutionary Genetics Analysis (2021 Nov 25) |
Final |
FINAL EXAM:
Monday, 09 Dec, 0900-1100 Sample questions |
Monday,
09 Dec 0900 - 1100 |
Expected time
from previous years |
|||
N&S (2013) |
Additional
Material from Nielsen & Slatkin (2013) |
|||||
3, 4 |
Coalescent Theory; Selective Neutrality | |||||
5 |
Population History & Demography |
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