Molecular Basis of Gene Mutation
In Principle:
    Mutations are changes in the DNA sequences

        mutations in DNA cause substitutions in protein
           Proteins do not mutate!

        spontaneous - 'naturally' occurring through alteration of base pairing
              versus induced - chemical [or high-energy radiation] mutagenesis

        germline - affects cells that produces eggs & sperm

                             heritable meiotically between generations (genetic)
               versus somatic  - affects cells that multiply mitotically (e.g. cancer)
                            non-heritable (but gene-based)                            


Molecular mechanisms of DNA mutagenesis

 Nucleotide interchanges are of two types
        transitions   - alternative pyrimidines [ CT ]  or purines [ AG ]
             Most mutations are transitions: interchanges of bases of same shape
        transversionspurine  pyrimidine [C / T A / G]
            depurination -
misrepair of base may produce transversion
                loss of purine (A or G) base in intact polynucleotide

                     produces apurinic  site
                     common form of damage in 'ancient' DNA

                apyrimidinic sites similar: loss of C or T

Spontaneous mutation
       tautomeric shift - spontaneous, transient rearrangement to alternative form
               keto (standard)  enol  (rare) forms of G & T
               amino (standard)  imino (rare) forms of A & C
               Both involve shift of H proton

       Non-standard bases have altered pairing rules :
               modified purine' bonds with alternative pyrimidine
               modified pyrimidine' bonds with alternative purine

                T' (enol)    pairs with G (keto)
                C' (imino)  pairs with A (amino)
                G' (enol)    pairs with T (keto)
                A' (imino)  pairs with C (amino)

        A tautomeric shift produces a transition mutation in the complementary strand [see example]

Homework: Based on this diagram, show that tautomeric shifts of the C, G, & T bases also produce transition mutations.


All text material ©2025 by Steven M. Carr