Mass Spectrometry Instruments

Agilent 1290 UHPLC-UV Sciex 7600 ZenoTOF (qTOF)

  • Agilent 1290 UHPLC-UV
    • Binary pump with a flow range from 0.05 to 5 mL/min up to 1300 bar
    • Multisampler with sample drawers for well plates and individual sample containers (2 x 54 vial containers); injection volume from 1 – 20 μL or 100 μl
    • Thermostatted multicolumn compartment (20 °C - 110 °C)
    • 1260 DAD WR (Diode Array Detector) with wavelength range from 190 nm to 950 nm
    • UHPLC-UV can be used independently on a separate station with OpenLab software
  • Sciex 7600 ZenoTOF (qTOF)
    • Turbolon Spray Source with Twin Sprayer ESI probe
    • Mass range for the TOF: up to 40 kDa. Precursor ion selection: m/z 5-2250
    • Mass resolution, positive ESI: equal to or greater than 42,000 (FWHM) measured on the [M+6H]6+charge isotope cluster for bovine insulin at 956 m/z
    • Mass accuracy over time, external: Less than 2ppm RMS over 12 hours of LC-MS
    • Sensitivity TOF MS – positive ESI: Reserpine 1pg on column for m/z 609.2806, with a 10mDa MEW (mass extraction window), S/N > 2500
    • Sensitivity Zeno MS/MS - positive ESI Reserpine 50 fg on column using the fragment m/z 195.0651, with a 10mDa MEW S/N > 400
    • Two novel technologies:
      • The Zeno trap that enables higher sensitivity
      • An EAD (electron activation dissociation) cell that enables an alternative fragmentation
    • Operating modes:
      • Full-scan TOF MS
      • Full scan TOF MS/MS
      • MRM HR
      • IDA
      • Zeno SWATH
    • SCIEX OS software for data acquisition and processing
    • Separate syringe pump (for infusion)
  • Funding Canada Foundation for Innovation (CFI) via the Innovation Fund program and Government of Newfoundland & Labrador department of Industry, Energy & Technology through a grant led by Dr Chris Kozak and collaborators

Agilent 1290 UHPLC- 6495D Triple Quadrupole LC/MS/MS

  • Agilent 1290 UHPLC-UV
    • Binary pump with a 0.05 - 5 mL/min flow range and up to 1300 bar
    • Vial sampler with two trays (2 x 66 vial containers); injection volume from 1 – 20 μL
    • Thermostatted multicolumn compartment  with a 4 °C - 110 °C temperature range
    • 1260 DAD WR (Diode Array Detector) with 190-950 nm wavelength range
  • Agilent 6495D Triple Quadrupole LC/MS/MS
    • Ion sources:
      • AJS ESI (jet stream technology)
      • APCI
    • Mass range: 5-3000 m/z
    • Resolution: unit= 0.7 Da
    • Scan speed: 18,700 Da/s
    • Sensitivity: reserpine IDL(instrument detection limit) < 0.4 fg
    • Operating modes:
      • Scan
      • SIM
      • MRM
      • Product Ion
      • Precursor Ion
      • Neutral Loss
      • Neutral Gain
      • dMRM
      • tMRM and
      • mixed
    • MRM speed: up to 700 MRM transitions
    • Mass Hunter 12.0 for Data Acquisition, Qualitative and Quantitative processing
  • Funding: Canada Foundation for Innovation (CFI) via the Innovation Fund program and Government of Newfoundland & Labrador department of Industry, Energy & Technology through a grant led by Dr Chris Kozak and collaborators

HPLC-MS (TOF): Agilent 1260 Infinity LC-6230 TOF LC/MS

Agilent 1260 Infinity LC-6230 TOF LC/MS in CCART facility

  • HPLC-UV
    • Quaternary pump with a flow range from 0.05 to 5 mL/min against up to 600 bar
    • Auto sampler that holds 100 samples, with injection volume of 1-100 µL
    • Thermostatted column compartment
    • 1260 DAD (Diode Array Detector) with wavelength range from 190nm to 640nm
    • Reverse and normal phase chromatography possible
    • Reverse phase HPLC columns available for use
    • For sample preparation, please follow the guidelines available under Links
  • MS with orthogonal TOF analyzer
    • ESI (Electrospray) for large polar compounds. Mass correction available.
    • APPI (Atmospheric Pressure Photoionization) for medium molecular weight, nonpolar compounds, that are not amenable by ESI.
    • Mass range:
      • High resolution and extended dynamic range 50 - 3,200 m/z
      • Extended mass range: 100 - 20,000 m/z
      • Resolution: 6,000 at 118 m/z and 15,000 at 2721 m/z
      • Mass accuracy: 1-10 ppm
  • Software: MassHunter Workstation version B.05.01
  • Funding: Canada Foundation for Innovation (CFI) through Prof. Graham Bodwell

MALDI: Bruker ultrafleXtreme MALDI TOF TOF

 

The Bruker UltraFlextreme MALDI in C-CART

  • Mass range up to 500 kDa
  • Linear Mode:
    • mass resolution: ≥ 1,100 for Myoglobin (m/z 16,952) FWHM
    • mass sensitivity: 500 fmol BSA (m/z 66,000) at S/N ≥ 100:1 shown with 1,000 laser shots
    • mass accuracy
  • Reflector Mode:
    • mass resolution: ≥ 40,000 for Somatostatin 28 (m/z 3,147.47) FWHM
    • mass resolution (protein mass range): ≥ 25,000 for Cytochrome C (m/z 12,361) FWHM
    • MS sensitivity: 250 amol [Glu1]-Fibrinopeptide B (m/z 1,570.7) at S/N ≥ 200:1 shown on Bruker AnchorChip™ target with 2,000 laser shots
    • mass accuracy (peptide mixture): ≤ 5 ppm with external calibration
  • Operating modes: MS and Lift (MS/MS)
  • FlexControl, FlexAnalysis, Polymerix and MestRe Nova software available for data processing.
  • Acquired through a CFI by Professors Christopher Kozak and Christina Bottaro 

GC-MS / FID: Agilent 8890- 5977 MSD and FID

 GCMS FID in the CCART facility

  • Separation, quantitative and qualitative analysis of volatile and semi volatile compounds
  • PAL auto sampler with 162 vial’ tray
  • Liquid injection for routine semi volatile compounds’ analysis
  • Static headspace and dynamic headspace (purge and trap) for the determination of volatile and semi-volatile analytes in liquids and solid matrices
  • Multimode inlet injectors
  • HP-5MS UI column installed (non-polar with low bleed characteristics); other columns available too
  • GC is interfaced to a single quadrupole 5977 MSD, mass range of 1.6 - 1090 Da
  • EI and CI ionization with methane reagent gas
  • NIST library, 2020 edition
  • FID detector
  • Mass Hunter Data acquisition and Data Processing software
  • For sample preparation, please follow the guidelines available under Links
  • Funding Canada Foundation for Innovation (CFI) via the Innovation Fund program and Government of Newfoundland & Labrador department of Industry, Energy & Technology through a grant led by Dr Chris Kozak and collaborators

GC-MS: Agilent 7890A GC – 5975C MSD Inert XL EI/CI

 The GCMS in the CCART facility

  • Separation, quantitative and qualitative analysis of semi volatile compounds 
    • EI ionization and CI ionization with methane reagent gas
  • Split/splitless injector
  • Auto sampler with 100-vial tray
  • Zebron ZB-5MS PLUS column (low polarity column with low bleed characteristics
  • GC is interfaced to a single quadrupole 5975 inert MSD with a mass range of 1.6 - 1050 m/z
  • Unit mass resolution over mass range
  • For sample preparation, please follow the guidelines available under Links
  • Funding through Prof. Cora Young