Primary,
Secondary, & Tertiary Structures of ribosomal RNA (rRNA)
The Primary Structure is the sequence of ribonucleotides
in the molecule. The sequence may be annotated to show
its relationships to Secondary Structure motifs.
In contrast with DNA, the -OH
on the 2'-carbon of the ribose sugar in RNA
prevents formation of stable double-helices. The SecondarySstructure
of rRNA in consequence is a complex pattern of
short double-stranded stems
[paired according to the same rules as DNA, with the
substitution of U for T] interspersed with unpaired single-stranded
loops and bubbles. Note that the rRNA structure above is
a single, continuous strand H-bonded back on itself, with a 5'
beginning and 3' end.
The Tertiary Structure of
rRNA is the 3-D folding of this structure
with itself amongst a complex of proteins.